Skip to main content
Advertisement

Main menu

  • Home
  • Content
    • Current Issue
    • Accepted Manuscripts
    • Article Preview
    • Past Issue Archive
    • Video Articles
    • AJNR Case Collection
    • Case of the Week Archive
    • Case of the Month Archive
    • Classic Case Archive
  • Special Collections
    • AJNR Awards
    • Low-Field MRI
    • Alzheimer Disease
    • ASNR Foundation Special Collection
    • Photon-Counting CT
    • View All
  • Multimedia
    • AJNR Podcasts
    • AJNR SCANtastic
    • Trainee Corner
    • MRI Safety Corner
    • Imaging Protocols
  • For Authors
    • Submit a Manuscript
    • Submit a Video Article
    • Submit an eLetter to the Editor/Response
    • Manuscript Submission Guidelines
    • Statistical Tips
    • Fast Publishing of Accepted Manuscripts
    • Graphical Abstract Preparation
    • Imaging Protocol Submission
    • Author Policies
  • About Us
    • About AJNR
    • Editorial Board
    • Editorial Board Alumni
  • More
    • Become a Reviewer/Academy of Reviewers
    • Subscribers
    • Permissions
    • Alerts
    • Feedback
    • Advertisers
    • ASNR Home

User menu

  • Alerts
  • Log in

Search

  • Advanced search
American Journal of Neuroradiology
American Journal of Neuroradiology

American Journal of Neuroradiology

ASHNR American Society of Functional Neuroradiology ASHNR American Society of Pediatric Neuroradiology ASSR
  • Alerts
  • Log in

Advanced Search

  • Home
  • Content
    • Current Issue
    • Accepted Manuscripts
    • Article Preview
    • Past Issue Archive
    • Video Articles
    • AJNR Case Collection
    • Case of the Week Archive
    • Case of the Month Archive
    • Classic Case Archive
  • Special Collections
    • AJNR Awards
    • Low-Field MRI
    • Alzheimer Disease
    • ASNR Foundation Special Collection
    • Photon-Counting CT
    • View All
  • Multimedia
    • AJNR Podcasts
    • AJNR SCANtastic
    • Trainee Corner
    • MRI Safety Corner
    • Imaging Protocols
  • For Authors
    • Submit a Manuscript
    • Submit a Video Article
    • Submit an eLetter to the Editor/Response
    • Manuscript Submission Guidelines
    • Statistical Tips
    • Fast Publishing of Accepted Manuscripts
    • Graphical Abstract Preparation
    • Imaging Protocol Submission
    • Author Policies
  • About Us
    • About AJNR
    • Editorial Board
    • Editorial Board Alumni
  • More
    • Become a Reviewer/Academy of Reviewers
    • Subscribers
    • Permissions
    • Alerts
    • Feedback
    • Advertisers
    • ASNR Home
  • Follow AJNR on Twitter
  • Visit AJNR on Facebook
  • Follow AJNR on Instagram
  • Join AJNR on LinkedIn
  • RSS Feeds

AJNR Awards, New Junior Editors, and more. Read the latest AJNR updates

Getting new auth cookie, if you see this message a lot, tell someone!
Research ArticlePEDIATRIC NEUROIMAGING
Open Access

Automatic Quantification of Normal Brain Gyrification Patterns and Changes in Fetuses with Polymicrogyria and Lissencephaly Based on MRI

Bossmat Yehuda, Aviad Rabinowich, Daphna Link-Sourani, Netanell Avisdris, Ori Ben-Zvi, Bella Specktor-Fadida, Leo Joskowicz, Liat Ben-Sira, Elka Miller and Dafna Ben Bashat
American Journal of Neuroradiology November 2023, DOI: https://doi.org/10.3174/ajnr.A8046
Bossmat Yehuda
aFrom the Sagol Brain Institute (B.Y., A.R., D.L.-S., N.A., O.B.-Z., D.B.B.), Tel Aviv Sourasky Medical Center, Tel Aviv, Israel
bSagol School of Neuroscience (B.Y., L.B.-S., D.B.B.), Tel Aviv University, Tel Aviv, Israel
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Bossmat Yehuda
Aviad Rabinowich
aFrom the Sagol Brain Institute (B.Y., A.R., D.L.-S., N.A., O.B.-Z., D.B.B.), Tel Aviv Sourasky Medical Center, Tel Aviv, Israel
cSackler Faculty of Medicine (A.R., L.B.-S., D.B.B.), Tel Aviv University, Tel Aviv, Israel
eDivision of Radiology (A.R., L.B.-S.), Tel Aviv Sourasky Medical Center, Tel Aviv, Israel
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Aviad Rabinowich
Daphna Link-Sourani
aFrom the Sagol Brain Institute (B.Y., A.R., D.L.-S., N.A., O.B.-Z., D.B.B.), Tel Aviv Sourasky Medical Center, Tel Aviv, Israel
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Daphna Link-Sourani
Netanell Avisdris
aFrom the Sagol Brain Institute (B.Y., A.R., D.L.-S., N.A., O.B.-Z., D.B.B.), Tel Aviv Sourasky Medical Center, Tel Aviv, Israel
dSchool of Computer Science and Engineering (N.A., L.J.), The Hebrew University of Jerusalem, Jerusalem, Israel
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Netanell Avisdris
Ori Ben-Zvi
aFrom the Sagol Brain Institute (B.Y., A.R., D.L.-S., N.A., O.B.-Z., D.B.B.), Tel Aviv Sourasky Medical Center, Tel Aviv, Israel
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Ori Ben-Zvi
Bella Specktor-Fadida
gSchool of Computer Science and Engineering (B.S.-F.), The Hebrew University of Jerusalem, Israel
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Leo Joskowicz
dSchool of Computer Science and Engineering (N.A., L.J.), The Hebrew University of Jerusalem, Jerusalem, Israel
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Leo Joskowicz
Liat Ben-Sira
bSagol School of Neuroscience (B.Y., L.B.-S., D.B.B.), Tel Aviv University, Tel Aviv, Israel
cSackler Faculty of Medicine (A.R., L.B.-S., D.B.B.), Tel Aviv University, Tel Aviv, Israel
eDivision of Radiology (A.R., L.B.-S.), Tel Aviv Sourasky Medical Center, Tel Aviv, Israel
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Liat Ben-Sira
Elka Miller
fDepartment of Medical Imaging (E.M.), Children’s Hospital of Eastern Ontario, University of Ottawa, Ottawa, Ontario, Canada
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Elka Miller
Dafna Ben Bashat
aFrom the Sagol Brain Institute (B.Y., A.R., D.L.-S., N.A., O.B.-Z., D.B.B.), Tel Aviv Sourasky Medical Center, Tel Aviv, Israel
bSagol School of Neuroscience (B.Y., L.B.-S., D.B.B.), Tel Aviv University, Tel Aviv, Israel
cSackler Faculty of Medicine (A.R., L.B.-S., D.B.B.), Tel Aviv University, Tel Aviv, Israel
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Dafna Ben Bashat
  • Article
  • Figures & Data
  • Supplemental
  • Info & Metrics
  • Responses
  • References
  • PDF
Loading

Article Figures & Data

Figures

  • Tables
  • FIG 1.
    • Download figure
    • Open in new tab
    • Download powerpoint
    FIG 1.

    Image-analysis pipeline: A, Brain detection. B, Brain component segmentation. C, GIA calculation based on the bounded area (yellow) between the cerebral cortex and its convex hull and the hemisphere area (green, surrounded by the yellow area). D, GIC calculation based on contour extraction of the cerebral hemisphere (red) and its convex hull (yellow). E, Example of GIC values in all slices of a single fetus. Outliers are marked in gray and were not included in the mean GIC.

  • FIG 2.
    • Download figure
    • Open in new tab
    • Download powerpoint
    FIG 2.

    T2-weighted MR imaging of coronal views for control fetuses demonstrating gyrification development of the right hemisphere (red, hemisphere contour) at the Sylvian fissure level with gestation.

  • FIG 3.
    • Download figure
    • Open in new tab
    • Download powerpoint
    FIG 3.

    Development curves with GA of area-based gyrification parameters. Curve percentile lines 3, 15, 50, 85, and 97 are presented as blue, light blue, purple, green, and yellow, respectively. Note control fetuses (gray), PMG (green), LIS (red), and suspected LIS (orange).

  • FIG 4.
    • Download figure
    • Open in new tab
    • Download powerpoint
    FIG 4.

    Development curves with GA of contour-based gyrification parameters. Curve percentile lines 3, 15, 50, 85, and 97 are presented as blue, light blue, purple, green, and yellow, respectively. Note control fetuses (gray), PMG (green), LIS (red), and suspected LIS (orange).

  • FIG 5.
    • Download figure
    • Open in new tab
    • Download powerpoint
    FIG 5.

    Symmetry indices for GI parameters with GA. All are close to zero, with homogeneous dispersion, indicating no brain asymmetry.

  • FIG 6.
    • Download figure
    • Open in new tab
    • Download powerpoint
    FIG 6.

    T2-weighted MR imaging of coronal views for controls and fetuses with LIS and PMG of equivalent ages. A, Control fetus, 33 weeks’ GA. B, Fetus diagnosed with LIS at 32 weeks’ GA, characterized by undeveloped gyrification patterns. C, Fetus diagnosed with PMG at 33 weeks’ GA, with abnormal excessive gyri (white arrows).

Tables

  • Figures
    • View popup
    Table 1:

    MR imaging data included in this study

    Vendor/System (Magnetic Field)SequenceNo.TE (Milliseconds [SD])TR (Milliseconds [SD])Spacing (mm [SD])
    GE Healthcare
     Discovery MR450 (1.5T)FRFSE40121.7 [SD, 2.3]9946.5 [SD, 1984.5]3.8 [SD, 0.8]
     Signa (1.5T)FIESTA101.7 [SD, 0.09]3.9 [SD, 0.2]4.6 [SD, 0.9]
    SS-FSE3111.7 [SD, 0.6]2517.4 [SD, 835.9]3.9 [SD, 0.65
    Siemens
     Magnetom Aera (1.5T)HASTE494 [SD, 0]1200 [SD, 0]3.05 [SD, 0.7]
     Magnetom Prisma (3T)HASTE296 [SD, 16.9]2000 [SD, 0]3.3 [SD, 1.8]
    TRUFI42.5 [SD, 0.01]4.9 [SD, 0.02]3.15 [SD, 0.3]
     Skyra (3T)HASTE3192.4 [SD, 21.7]1839.1 [SD, 325.1]3.5 [SD, 0.6]
    TRUFI72.5 [SD, 0.04]4.9 [SD, 0.08]3.9 [SD, 0.7]
     Magnetom Vida (3T)TRUFI12.5 [SD, 0]4.9 [SD, 0]3 [SD, 0]
    • Note:—SS-FSE indicates single-shot, fast spin-echo; TRUFI, true fast imaging with steady-state free precession; FRFSE, fast recovery fast spin echo; HASTE, Half-Fourier acquisition single-shot turbo spin-echo.

    • View popup
    Table 2:

    Comparisons between LIS or PMG with control fetuses—the adjusted P values and CIs

    ParameterLISPMG
    P Value(CI Lower, CI Upper)P Value(CI Lower, CI Upper)
    Mean GIC right.002a(0.001–0.007)<.001a(0.002–0.008)
    Mean GIC left.002a(0.001–0.007)<.001a(0.002–0.008)
    Max GIC right<.001a(0.004–0.01)<.001a(0.003–0.008)
    Max GIC left<.001a(0.004–0.009).001a(0.002–0.007)
    Bounded volume right.01 a(0.0003–0.001).994(–0.0004–0.0004)
    Bounded volume left<.001a(0.0003–0.009).366(–0.0006–0.0002)
    Mean GIA right<.001a(0.0006–0.001).46(–0.0002–0.0006)
    Mean GIA left<.001a(0.0006–0.001).46(–0.0003–0.0005)
    Max GIA right.02a(0.0002–0.002).88(–0.001–0.001)
    Max GIA left<.001a(0.0008–0.003).994(–0.001–0.001)
    • a P value < .05.

PreviousNext
Back to top
Advertisement
Print
Download PDF
Email Article

Thank you for your interest in spreading the word on American Journal of Neuroradiology.

NOTE: We only request your email address so that the person you are recommending the page to knows that you wanted them to see it, and that it is not junk mail. We do not capture any email address.

Enter multiple addresses on separate lines or separate them with commas.
Automatic Quantification of Normal Brain Gyrification Patterns and Changes in Fetuses with Polymicrogyria and Lissencephaly Based on MRI
(Your Name) has sent you a message from American Journal of Neuroradiology
(Your Name) thought you would like to see the American Journal of Neuroradiology web site.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Cite this article
Bossmat Yehuda, Aviad Rabinowich, Daphna Link-Sourani, Netanell Avisdris, Ori Ben-Zvi, Bella Specktor-Fadida, Leo Joskowicz, Liat Ben-Sira, Elka Miller, Dafna Ben Bashat
Automatic Quantification of Normal Brain Gyrification Patterns and Changes in Fetuses with Polymicrogyria and Lissencephaly Based on MRI
American Journal of Neuroradiology Nov 2023, DOI: 10.3174/ajnr.A8046

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
0 Responses
Respond to this article
Share
Bookmark this article
Automatic Quantification of Normal Brain Gyrification Patterns and Changes in Fetuses with Polymicrogyria and Lissencephaly Based on MRI
Bossmat Yehuda, Aviad Rabinowich, Daphna Link-Sourani, Netanell Avisdris, Ori Ben-Zvi, Bella Specktor-Fadida, Leo Joskowicz, Liat Ben-Sira, Elka Miller, Dafna Ben Bashat
American Journal of Neuroradiology Nov 2023, DOI: 10.3174/ajnr.A8046
del.icio.us logo Twitter logo Facebook logo Mendeley logo
  • Tweet Widget
  • Facebook Like
  • Google Plus One
Purchase

Jump to section

  • Article
    • Abstract
    • ABBREVIATIONS:
    • MATERIALS AND METHODS
    • RESULTS
    • DISCUSSION
    • CONCLUSIONS
    • Acknowledgments
    • Footnotes
    • References
  • Figures & Data
  • Supplemental
  • Info & Metrics
  • Responses
  • References
  • PDF

Related Articles

  • PubMed
  • Google Scholar

Cited By...

  • No citing articles found.
  • Crossref
  • Google Scholar

This article has not yet been cited by articles in journals that are participating in Crossref Cited-by Linking.

More in this TOC Section

  • Frontal Paraventricular Cysts
  • Sodium MRI in Pediatric Brain Tumors
  • FRACTURE MR in Congenital Vertebral Anomalies
Show more Pediatric Neuroimaging

Similar Articles

Advertisement

Indexed Content

  • Current Issue
  • Accepted Manuscripts
  • Article Preview
  • Past Issues
  • Editorials
  • Editor's Choice
  • Fellows' Journal Club
  • Letters to the Editor
  • Video Articles

Cases

  • Case Collection
  • Archive - Case of the Week
  • Archive - Case of the Month
  • Archive - Classic Case

More from AJNR

  • Trainee Corner
  • Imaging Protocols
  • MRI Safety Corner
  • Book Reviews

Multimedia

  • AJNR Podcasts
  • AJNR Scantastics

Resources

  • Turnaround Time
  • Submit a Manuscript
  • Submit a Video Article
  • Submit an eLetter to the Editor/Response
  • Manuscript Submission Guidelines
  • Statistical Tips
  • Fast Publishing of Accepted Manuscripts
  • Graphical Abstract Preparation
  • Imaging Protocol Submission
  • Evidence-Based Medicine Level Guide
  • Publishing Checklists
  • Author Policies
  • Become a Reviewer/Academy of Reviewers
  • News and Updates

About Us

  • About AJNR
  • Editorial Board
  • Editorial Board Alumni
  • Alerts
  • Permissions
  • Not an AJNR Subscriber? Join Now
  • Advertise with Us
  • Librarian Resources
  • Feedback
  • Terms and Conditions
  • AJNR Editorial Board Alumni

American Society of Neuroradiology

  • Not an ASNR Member? Join Now

© 2025 by the American Society of Neuroradiology All rights, including for text and data mining, AI training, and similar technologies, are reserved.
Print ISSN: 0195-6108 Online ISSN: 1936-959X

Powered by HighWire